CDS

Accession Number TCMCG006C23396
gbkey CDS
Protein Id XP_022553244.1
Location join(24575401..24575410,24575532..24575733,24575735..24575946,24575949..24576000,24576002..24576046,24576048..24576106,24576109..24576141,24576144..24576174,24576176..24576287)
Gene LOC106388301
GeneID 106388301
Organism Brassica napus

Protein

Length 258aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022697523.1
Definition LOW QUALITY PROTEIN: 3-isopropylmalate dehydratase small subunit 1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category E
Description 3-isopropylmalate dehydratase small subunit
KEGG_TC -
KEGG_Module M00432        [VIEW IN KEGG]
M00535        [VIEW IN KEGG]
KEGG_Reaction R03896        [VIEW IN KEGG]
R03898        [VIEW IN KEGG]
R03968        [VIEW IN KEGG]
R04001        [VIEW IN KEGG]
R08620        [VIEW IN KEGG]
R08624        [VIEW IN KEGG]
R08628        [VIEW IN KEGG]
R08634        [VIEW IN KEGG]
R08641        [VIEW IN KEGG]
R08645        [VIEW IN KEGG]
R10170        [VIEW IN KEGG]
KEGG_rclass RC00497        [VIEW IN KEGG]
RC00976        [VIEW IN KEGG]
RC00977        [VIEW IN KEGG]
RC01041        [VIEW IN KEGG]
RC01046        [VIEW IN KEGG]
RC03072        [VIEW IN KEGG]
BRITE br01601        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01704        [VIEW IN KEGG]
ko:K21359        [VIEW IN KEGG]
EC 4.2.1.170        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.1.33        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.1.35        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00290        [VIEW IN KEGG]
ko00660        [VIEW IN KEGG]
ko00966        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01210        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00290        [VIEW IN KEGG]
map00660        [VIEW IN KEGG]
map00966        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01210        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003861        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006790        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016143        [VIEW IN EMBL-EBI]
GO:0016144        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016836        [VIEW IN EMBL-EBI]
GO:0019748        [VIEW IN EMBL-EBI]
GO:0019757        [VIEW IN EMBL-EBI]
GO:0019758        [VIEW IN EMBL-EBI]
GO:0019760        [VIEW IN EMBL-EBI]
GO:0019761        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044272        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044550        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901657        [VIEW IN EMBL-EBI]
GO:1901659        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACTATCGACAAGTTCGATCACAGAGCCAAAATATACAACAATAGTGTGTTCTCTTCGTACGTTGCCCCACCTTCTTCATCAAGCAAACCTTTTTCACCCTTCCCCCAAAATCAAAGCTTCCACTTCATCTCCTCTTCTATTTCCCTCTCTTCGCATGGCTTATCCTTCATCATCCTGTGCGCCACTGCCACCTTCAAAGAATCCCCCTCGGAAACCCTATCTAAATCCACCTGCAACGGTTTCTGCTACATCCTGAAAGACAACATGGACACCAACCAGATCATTCCAGCAGACAAAGCCTGCATATTCCCGTCCAACCAGAAAGAACCTGAGGAGATAGGCTGTAACCCTCTCTCATATCTACCAAACTCCCAAAAACCCCGGTTGGTTGATCCAGGAGAGATCATATCAAAATACTCGATAATACCCGATGAAAACTTTGGTTGCGGTTGCGGATTGTCACGTGAACACGTCTGTATGCTAGGAGCAACCACAGCTAAAGCCGCTGTTTCCCAGACTAAGATTTAGTTCAGTAACTCGATGGCTACAGGAGAGGTGTTTCCACTCCAGTCAAAGGAAGTCTGTGATGAATATAAGACAGGAGACACGGAGATTGAGCTGAGAGATAGTGGTGGTTTACTGAAGTATAAACTGAATGCCATCGGTGATGCCCAACCGGTTATTGATGCTGGTGGTGTCTTTGTTTATGCGAGGAAGATAGGAGGAATGATTCCATCTCCATCAGTAGCTTAA
Protein:  
MTIDKFDHRAKIYNNSVFSSYVAPPSSSSKPFSPFPQNQSFHFISSSISLSSHGLSFIILCATATFKESPSXETLSKSTCNGFCYILKDNMDTNQIIPADKACIFPSNQKEPEEIGCNPLSYLPNSQKPRLVDPGEIISKYSIXIPDENFGCGCGLSREHVXCMLGATTAKAAVSQTXKIXFSNSMATGEVFPLQSKVXVCDEYKTGDTVXIELRDSGGLLXKYKLNAIGDAQPVIDAGGVFVYARKIGGMIPSPSVA